Ways to Install and Uninstall snap-aligner on Ubuntu 22.04

Updated: October 25, 2022

SNAP is a new sequence aligner that is 3-20x faster and just as accurate as existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86 processors, and supports a rich error model that lets it cheaply match reads with more differences from the reference than other tools. This gives SNAP up to 2x lower error rates than existing tools (in some cases) and lets it match larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting, duplicate marking, and BAM indexing. In this guide, I will show you ways to install snap-aligner Ubuntu 22.04.

Prerequisites to install

  • OS: Ubuntu 22.04 or older Ubuntu versions
  • Privileges: Ascertain that you are able to execute sudo commands.

Prerequisites to install snap-aligner on Ubuntu 22.04

Install snap-aligner Ubuntu 22.04

snap-aligner is one of the popular ways on Ubuntu now so that this tutorial will show you some ways to install it. Choose the one you believe is simple and easy to follow.

Install snap-aligner using APT

This is one of the most popular methods for installing Ubuntu packages since it is simple to understand, even if you are a Linux novice. Following these steps to get snap-aligner on your Ubuntu.

Step 1: You must update the APT package repository cache before attempting to install, update, or remove any packages. Update the APT database to download new packages from Ubuntu. Opening the terminal and executing the following Linux command:

sudo apt-get -y update

Step 2: Start the package installation on Ubuntu 22.04. You can now install snap-aligner Ubuntu by executing this command in the terminal.

sudo apt install snap-aligner

Install snap-aligner using Aptitude

If you haven’t already installed Aptitude on Ubuntu, run this command to do so.

sudo apt-get install aptitude

After that, you can now install snap-aligner by following these steps:

Step 1: Obtain new packages from Ubuntu by updating the APT database. Launch the terminal and enter the following Linux command:

sudo apt -y update

Step 2: Start the package installation on Ubuntu 22.04. After updating, you can install snap-aligner Ubuntu by executing this command in the terminal.

sudo aptitude -y install snap-aligner

Uninstall snap-aligner on Ubuntu 22.04

Have you ever considered how challenging it might be to uninstall an application from Ubuntu? You’re wrong, anyone can easily uninstall any program, not just a snap-aligner.

This command can be used to uninstall snap-aligner from Ubuntu 22.04 if it was installed using APT or Aptitude.

sudo apt remove --auto-remove snap-aligner

To uninstall snap-aligner and remove its data and dependencies, you can also use the following command:

sudo apt autoremove --purge snap-aligner

Summary

In this guide, I showed you ways to install snap-aligner on Ubuntu 22.04 and some ways to uninstall snap-aligner too. Please contact me if you require any assistance. I’d be delighted to respond.