How to Uninstall or Install beast-mcmc on Ubuntu 22.04

Updated: September 1, 2022

BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability. Included is a simple to use user-interface program for setting up standard analyses and a suit of programs for analysing the results. In this guide, I will show you how to install beast-mcmc on Ubuntu 22.04.

Prerequisites to install

  • OS: Ubuntu 22.04 or older Ubuntu versions
  • Privileges: Check that you can run sudo commands.

Prerequisites to install beast-mcmc on Ubuntu 22.04

Install beast-mcmc Ubuntu 22.04

beast-mcmc is one of the popular ways on Ubuntu now so that this tutorial will show you some ways to install it. Choose the one you believe is simple and easy to follow.

Install beast-mcmc using APT

This is one of the popular ways to install any Ubuntu packages because it’s easy to follow, even if you are a newbie in Linux. Following these instructions to install beast-mcmc on your Ubuntu.

Step 1: Update the APT database to download new packages from Ubuntu. Launching the terminal and entering the following Linux command:

sudo apt-get update

Step 2: Start the package installation on Ubuntu 22.04. You can now install beast-mcmc Ubuntu by executing this command in the terminal.

sudo apt-get -y install beast-mcmc

Install beast-mcmc using Aptitude

If you didn’t install Aptitude on Ubuntu, you need to install it by executing this command.

sudo apt-get -y install aptitude

Then, you can now install beast-mcmc, just following these steps:

Step 1: The APT package repository cache needs to be updated before you try to install, update, or remove any packages. Update the APT database to fetch new packages from Ubuntu. Launching the terminal and entering the following Linux command:

sudo apt update

Step 2: Start the package installation on Ubuntu 22.04. You can now install beast-mcmc Ubuntu by executing this command in the terminal.

sudo aptitude install beast-mcmc

Uninstall beast-mcmc on Ubuntu 22.04

Have you ever thought that uninstalling an application from Ubuntu might be challenging? You’re wrong; any program, not just a beast-mcmc, can be easily uninstalled by anyone.

If you installed beast-mcmc using APT or Aptitude, you could uninstall beast-mcmc on Ubuntu by following this step:

sudo apt remove --auto-remove beast-mcmc

To uninstall beast-mcmc and remove its data and dependencies, you can also use the following command:

sudo apt autoremove --purge beast-mcmc

Summary

In this guide, I showed you ways to install beast-mcmc on Ubuntu 22.04 and some ways to uninstall beast-mcmc too. Please do not hesitate to contact me if you require any assistance. I’m delighted to respond to them.